Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 AC089987.1-201ENST00000551654 2209 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 AC011474.4-201ENST00000623523 2076 ntBASIC16.22■□□□□ 0.19
RCCD1A6NED2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 MBLAC2-202ENST00000514906 1936 ntBASIC16.22■□□□□ 0.19
RCCD1A6NED2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 HLA-K-203ENST00000430151 1046 ntBASIC16.22■□□□□ 0.19
RCCD1A6NED2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCCD1A6NED2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RCCD1A6NED2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 SPDYE7P-202ENST00000420373 878 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 DNAJB3-201ENST00000446806 729 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 HLA-V-204ENST00000476601 1289 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 GAPDHP40-201ENST00000505218 1006 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 AC010327.4-202ENST00000591484 748 ntBASIC16.21■□□□□ 0.19
RCCD1A6NED2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RCCD1A6NED2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCCD1A6NED2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms