Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC66A2RUB6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AL645939.2-201ENST00000427340 991 ntBASIC16.66■□□□□ 0.26
CCDC66A2RUB6 ADH5P3-201ENST00000433842 1137 ntBASIC16.66■□□□□ 0.26
CCDC66A2RUB6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 EEF1DP4-201ENST00000446006 880 ntBASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 KRT8P37-201ENST00000451609 1420 ntBASIC16.66■□□□□ 0.26
CCDC66A2RUB6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC66A2RUB6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AC126365.1-201ENST00000578585 1514 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 KRT8P44-201ENST00000441609 1350 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 PHKG1P2-201ENST00000457537 863 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AC243562.1-201ENST00000560672 389 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AP000842.3-202ENST00000569238 1080 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AC092902.6-201ENST00000641783 218 ntBASIC16.65■□□□□ 0.26
CCDC66A2RUB6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC66A2RUB6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms