Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CTBP2P3-201ENST00000585629 1255 ntBASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ATP5G2P4-201ENST00000442175 420 ntBASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TTTY23B-201ENST00000442790 549 ntBASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM261P1-201ENST00000604899 340 ntBASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IGHV3-72-202ENST00000621503 303 ntBASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL390755.1-201ENST00000623716 2027 ntBASIC12.32□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms