Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BIVM-ERCC5R4GMW8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 SIGLEC18P-201ENST00000602271 909 ntBASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 MRPL37P1-201ENST00000592451 1337 ntBASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 API5-203ENST00000455725 2257 ntTSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC24.62■■□□□ 1.53
BIVM-ERCC5R4GMW8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 RPL7P35-201ENST00000446943 740 ntBASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC009560.1-201ENST00000620208 434 ntBASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 SSR4P1-203ENST00000599569 2260 ntBASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC139712.1-201ENST00000378256 1875 ntBASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 MARK2P16-201ENST00000605714 1723 ntBASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC24.61■■□□□ 1.53
BIVM-ERCC5R4GMW8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 RN7SL277P-201ENST00000481521 288 ntBASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC107464.3-201ENST00000609172 737 ntBASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BIVM-ERCC5R4GMW8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC136621.1-201ENST00000624017 2304 ntBASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 AC026410.1-201ENST00000507366 1101 ntBASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BIVM-ERCC5R4GMW8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms