Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHA7Q9UN72 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHA7Q9UN72 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHA7Q9UN72 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AC004890.2-204ENST00000481968 304 ntBASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AC135586.1-201ENST00000539323 574 ntBASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 AL137783.1-201ENST00000623494 1896 ntBASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHA7Q9UN72 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AL158070.2-201ENST00000623713 1621 ntBASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AC023090.2-201ENST00000625182 2110 ntBASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AC023511.2-201ENST00000618803 211 ntBASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AL390754.1-201ENST00000619088 582 ntBASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA7Q9UN72 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 KRT18P28-201ENST00000453838 1332 ntBASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 AC055876.3-201ENST00000431496 288 ntBASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 AL353779.1-201ENST00000434793 351 ntBASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 AC026410.3-201ENST00000514280 936 ntBASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA7Q9UN72 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms