Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 AL512430.1-201ENST00000392575 860 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC026320.2-201ENST00000434379 478 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC008723.1-201ENST00000506922 207 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC007881.3-201ENST00000608897 607 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 MEG3_2.1-201ENST00000611456 105 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.17■□□□□ 0.34
CPA4Q9UI42 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPA4Q9UI42 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.17■□□□□ 0.34
CPA4Q9UI42 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 AL359258.3-201ENST00000622910 2331 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 PCDHA14-201ENST00000506751 2298 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 AC097065.1-201ENST00000425737 517 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 AC078875.1-201ENST00000431907 724 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 RBM8B-201ENST00000555532 525 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 DNM1P30-201ENST00000563586 452 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 AL031713.1-201ENST00000564813 661 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 MIR3677-201ENST00000578964 60 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 AC009884.2-201ENST00000603110 324 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 LINC02199-201ENST00000506655 2702 ntBASIC17.16■□□□□ 0.34
CPA4Q9UI42 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPA4Q9UI42 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.16■□□□□ 0.34
CPA4Q9UI42 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms