Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CNIH4Q9P003 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CNIH4Q9P003 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CNIH4Q9P003 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNIH4Q9P003 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNIH4Q9P003 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CNIH4Q9P003 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNIH4Q9P003 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNIH4Q9P003 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNIH4Q9P003 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CNIH4Q9P003 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNIH4Q9P003 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AC013726.1-201ENST00000563747 2285 ntBASIC14.33□□□□□ -0.12
CNIH4Q9P003 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 COX5BP8-201ENST00000416911 349 ntBASIC14.33□□□□□ -0.12
CNIH4Q9P003 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 KRT17P7-201ENST00000451704 1104 ntBASIC14.33□□□□□ -0.12
CNIH4Q9P003 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNIH4Q9P003 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.33□□□□□ -0.12
CNIH4Q9P003 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNIH4Q9P003 AC098850.1-201ENST00000419919 790 ntBASIC14.32□□□□□ -0.12
CNIH4Q9P003 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 CTBP2P3-201ENST00000585629 1255 ntBASIC14.32□□□□□ -0.12
CNIH4Q9P003 BRI3BPP1-201ENST00000594224 787 ntBASIC14.32□□□□□ -0.12
CNIH4Q9P003 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 AC133539.2-201ENST00000604757 467 ntBASIC14.32□□□□□ -0.12
CNIH4Q9P003 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 AL035252.4-201ENST00000624174 288 ntBASIC14.32□□□□□ -0.12
CNIH4Q9P003 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.32□□□□□ -0.12
CNIH4Q9P003 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms