Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SPDYE22P-201ENST00000582158 798 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CTBP2P3-201ENST00000585629 1255 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AC027307.3-201ENST00000594262 1100 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 PRSS30P-206ENST00000641773 873 ntBASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN4Q9NRR5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 LINC00528-201ENST00000600723 2160 ntBASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AL162726.2-201ENST00000438986 1017 ntBASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AP001582.1-201ENST00000525856 295 ntBASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AC138761.1-201ENST00000584393 385 ntBASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBQLN4Q9NRR5 AC099063.4-201ENST00000641099 1602 ntBASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms