Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 CICP6-201ENST00000457191 2729 ntBASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM7Q9NR12 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 AL359258.3-201ENST00000622910 2331 ntBASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 CHMP1AP1-201ENST00000445563 662 ntBASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 AL391280.1-201ENST00000506969 1062 ntBASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 AL109954.1-202ENST00000564051 2148 ntBASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 KRT8P29-201ENST00000420409 1371 ntBASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.88■□□□□ 0.29
PDLIM7Q9NR12 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC138035.3-201ENST00000622706 2791 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AL162727.3-201ENST00000635661 2787 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC021723.1-201ENST00000486306 515 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC022616.1-201ENST00000518688 554 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AL023803.2-201ENST00000620080 638 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 AL603764.1-201ENST00000636452 321 ntBASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDLIM7Q9NR12 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDLIM7Q9NR12 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms