Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 GNG10P1-201ENST00000452289 199 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC026434.2-201ENST00000506094 1078 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 MIR2278-201ENST00000516344 96 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 OR5BD1P-201ENST00000532527 817 ntBASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.81□□□□□ -0.2
CHD8Q9HCK8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 OR10N1P-201ENST00000392758 869 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 HLA-DMA-202ENST00000395303 1007 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 AL512599.1-201ENST00000430724 685 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 RPL18AP8-201ENST00000486071 528 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 AP003040.1-201ENST00000532044 1024 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 AC023968.2-201ENST00000560593 1049 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 NEK4P3-201ENST00000604859 544 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.8□□□□□ -0.2
CHD8Q9HCK8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHD8Q9HCK8 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 GGTLC4P-201ENST00000402176 664 ntBASIC13.79□□□□□ -0.2
CHD8Q9HCK8 GUSBP10-201ENST00000417412 665 ntBASIC13.79□□□□□ -0.2
CHD8Q9HCK8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHD8Q9HCK8 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms