Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 SLC7A15P-201ENST00000424028 1363 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 INTS4P2-202ENST00000614726 2019 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AL442647.2-201ENST00000429864 857 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 HLA-K-203ENST00000430151 1046 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 INGX-202ENST00000489074 768 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AC104596.2-201ENST00000512793 793 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 PRSS30P-206ENST00000641773 873 ntBASIC14.6□□□□□ -0.07
BRF2Q9HAW0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BRF2Q9HAW0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AC134915.1-201ENST00000426461 574 ntBASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AC007431.3-201ENST00000623221 587 ntBASIC14.59□□□□□ -0.07
BRF2Q9HAW0 BX539320.1-201ENST00000623759 877 ntBASIC14.59□□□□□ -0.07
BRF2Q9HAW0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 AL391825.1-201ENST00000457671 1364 ntBASIC14.59□□□□□ -0.07
BRF2Q9HAW0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.59□□□□□ -0.07
BRF2Q9HAW0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.58□□□□□ -0.07
BRF2Q9HAW0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
BRF2Q9HAW0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BRF2Q9HAW0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
BRF2Q9HAW0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms