Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF41Q9H4P4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF41Q9H4P4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 AC079776.1-201ENST00000401540 1152 ntBASIC17.95■□□□□ 0.46
RNF41Q9H4P4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF41Q9H4P4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 AL512343.1-201ENST00000605837 169 ntBASIC17.94■□□□□ 0.46
RNF41Q9H4P4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF41Q9H4P4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF41Q9H4P4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms