Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM5Q9C035 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AC011474.4-201ENST00000623523 2076 ntBASIC17.1■□□□□ 0.33
TRIM5Q9C035 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 KRT18P2-201ENST00000447938 1258 ntBASIC17.1■□□□□ 0.33
TRIM5Q9C035 AC093909.1-201ENST00000504731 1122 ntBASIC17.1■□□□□ 0.33
TRIM5Q9C035 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 PDPK2P-202ENST00000562415 1191 ntBASIC17.1■□□□□ 0.33
TRIM5Q9C035 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 Z83851.2-201ENST00000609564 659 ntBASIC17.1■□□□□ 0.33
TRIM5Q9C035 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM5Q9C035 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM5Q9C035 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 TFAMP1-201ENST00000412727 736 ntBASIC17.09■□□□□ 0.33
TRIM5Q9C035 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM5Q9C035 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRIM5Q9C035 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM5Q9C035 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM5Q9C035 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM5Q9C035 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 2978.1 ms