Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL25A1Q9BXS0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 KRT18P36-201ENST00000411618 1276 ntBASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 AC025594.1-201ENST00000469533 543 ntBASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 AC148476.1-201ENST00000622182 705 ntBASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.98□□□□□ -0.01
COL25A1Q9BXS0 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC000078.1-201ENST00000420617 682 ntBASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 ALG3P1-201ENST00000508806 1114 ntBASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC112694.1-202ENST00000540985 943 ntBASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL25A1Q9BXS0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL25A1Q9BXS0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms