Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 FAM58CP-201ENST00000435741 640 ntBASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 AC068137.2-201ENST00000605408 478 ntBASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 SLC22A20-204ENST00000530038 1673 ntBASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NDUFAF3Q9BU61 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 MIR648-201ENST00000385046 94 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 CNN2P11-201ENST00000429351 262 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 FAM185BP-201ENST00000443595 716 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 AC112191.1-201ENST00000523689 701 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 OR7E47P-204ENST00000575924 449 ntBASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NDUFAF3Q9BU61 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms