Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC098850.1-201ENST00000419919 790 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC007389.4-201ENST00000454674 793 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 ENPP7P5-201ENST00000541031 1031 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC015910.1-201ENST00000579400 975 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC015936.2-201ENST00000593177 259 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 WFDC1-204ENST00000613603 549 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AL033527.5-201ENST00000641382 801 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 INTS4P2-202ENST00000614726 2019 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 AC005252.3-201ENST00000623855 2258 ntBASIC10.72□□□□□ -0.69
UPK3BQ9BT76 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
UPK3BQ9BT76 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC092364.2-201ENST00000596710 2692 ntBASIC10.71□□□□□ -0.69
UPK3BQ9BT76 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC134915.1-201ENST00000426461 574 ntBASIC10.71□□□□□ -0.69
UPK3BQ9BT76 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 MIR4313-201ENST00000580760 101 ntBASIC10.71□□□□□ -0.69
UPK3BQ9BT76 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.71□□□□□ -0.69
UPK3BQ9BT76 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UPK3BQ9BT76 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
UPK3BQ9BT76 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
UPK3BQ9BT76 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
UPK3BQ9BT76 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.7
UPK3BQ9BT76 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms