Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 AC015910.1-201ENST00000579400 975 ntBASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 AL390755.1-201ENST00000623716 2027 ntBASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM56Q9BRZ2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC007191.1-201ENST00000623179 2995 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC232323.1-201ENST00000540724 2099 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 REXO1L5P-201ENST00000622260 2098 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 HLA-V-204ENST00000476601 1289 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC051619.7-201ENST00000568314 623 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC093028.1-201ENST00000622998 982 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 TUBB3P1-201ENST00000405796 1332 ntBASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM56Q9BRZ2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM56Q9BRZ2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM56Q9BRZ2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms