Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN18Q99952 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN18Q99952 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PTPN18Q99952 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 AL807761.2-201ENST00000422849 729 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPN18Q99952 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN18Q99952 MRPL22P1-201ENST00000505398 616 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 AC026410.1-201ENST00000507366 1101 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN18Q99952 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN18Q99952 ALG1L6P-201ENST00000515248 758 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN18Q99952 C2orf69P1-201ENST00000563532 1093 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 AC107464.3-201ENST00000609172 737 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PTPN18Q99952 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PTPN18Q99952 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
PTPN18Q99952 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN18Q99952 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN18Q99952 AD000864.1-201ENST00000624076 2295 ntBASIC17.16■□□□□ 0.34
PTPN18Q99952 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN18Q99952 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 CICP13-201ENST00000422015 2789 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 HIST2H2BA-201ENST00000412169 381 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN18Q99952 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 RPSAP15-201ENST00000448168 861 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN18Q99952 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 AC093752.3-201ENST00000567343 901 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 AC003102.2-201ENST00000589195 1469 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 IL9RP3-201ENST00000442856 1674 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 PCDHA14-201ENST00000506751 2298 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN18Q99952 AL603832.2-201ENST00000566195 2125 ntBASIC17.15■□□□□ 0.34
PTPN18Q99952 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPN18Q99952 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN18Q99952 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
PTPN18Q99952 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PTPN18Q99952 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.14■□□□□ 0.33
PTPN18Q99952 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.14■□□□□ 0.33
PTPN18Q99952 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTPN18Q99952 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTPN18Q99952 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms