Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.93■□□□□ 0.14
SMOQ99835 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.93■□□□□ 0.14
SMOQ99835 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.93■□□□□ 0.14
SMOQ99835 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.93■□□□□ 0.14
SMOQ99835 MESTP3-201ENST00000503460 968 ntBASIC15.93■□□□□ 0.14
SMOQ99835 AP003171.2-201ENST00000528208 925 ntBASIC15.93■□□□□ 0.14
SMOQ99835 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.93■□□□□ 0.14
SMOQ99835 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.93■□□□□ 0.14
SMOQ99835 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SMOQ99835 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 AC144831.1-201ENST00000573312 2656 ntBASIC15.92■□□□□ 0.14
SMOQ99835 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SMOQ99835 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 LINC00528-201ENST00000600723 2160 ntBASIC15.92■□□□□ 0.14
SMOQ99835 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SMOQ99835 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.92■□□□□ 0.14
SMOQ99835 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.92■□□□□ 0.14
SMOQ99835 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 AL583810.1-201ENST00000553344 1045 ntBASIC15.92■□□□□ 0.14
SMOQ99835 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 AC138466.3-201ENST00000619983 221 ntBASIC15.92■□□□□ 0.14
SMOQ99835 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 AC023090.2-201ENST00000625182 2110 ntBASIC15.92■□□□□ 0.14
SMOQ99835 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.92■□□□□ 0.14
SMOQ99835 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SMOQ99835 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SMOQ99835 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SMOQ99835 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SMOQ99835 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMOQ99835 AL354989.2-201ENST00000435838 1540 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms