Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.59■□□□□ 0.73
ABCA3Q99758 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ABCA3Q99758 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCA3Q99758 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 AP002353.1-201ENST00000528257 1599 ntBASIC19.58■□□□□ 0.73
ABCA3Q99758 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
ABCA3Q99758 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCA3Q99758 CTBP2P8-201ENST00000422584 1330 ntBASIC19.58■□□□□ 0.73
ABCA3Q99758 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
ABCA3Q99758 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.58■□□□□ 0.72
ABCA3Q99758 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.58■□□□□ 0.72
ABCA3Q99758 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCA3Q99758 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ABCA3Q99758 HERC2P11-201ENST00000562845 725 ntBASIC19.58■□□□□ 0.72
ABCA3Q99758 AC100756.2-201ENST00000569537 736 ntBASIC19.58■□□□□ 0.72
ABCA3Q99758 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.58■□□□□ 0.72
ABCA3Q99758 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.58■□□□□ 0.72
ABCA3Q99758 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ABCA3Q99758 AC010491.1-201ENST00000563101 2797 ntBASIC19.58■□□□□ 0.72
ABCA3Q99758 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
ABCA3Q99758 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ABCA3Q99758 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ABCA3Q99758 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCA3Q99758 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.57■□□□□ 0.72
ABCA3Q99758 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCA3Q99758 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCA3Q99758 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 SCARNA12-201ENST00000459155 270 ntBASIC19.57■□□□□ 0.72
ABCA3Q99758 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 ABHD17AP9-201ENST00000561925 548 ntBASIC19.57■□□□□ 0.72
ABCA3Q99758 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCA3Q99758 MME-218ENST00000625667 363 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCA3Q99758 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.57■□□□□ 0.72
ABCA3Q99758 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.57■□□□□ 0.72
ABCA3Q99758 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 AL136172.1-201ENST00000598590 1394 ntBASIC19.57■□□□□ 0.72
ABCA3Q99758 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.57■□□□□ 0.72
ABCA3Q99758 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ABCA3Q99758 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.57■□□□□ 0.72
ABCA3Q99758 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCA3Q99758 PTGER4P2-201ENST00000328411 252 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 PTGER4P3-201ENST00000458150 252 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 RN7SL564P-201ENST00000496309 250 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 AC124068.2-201ENST00000569473 1109 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms