Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.16□□□□□ -0.3
GFI1Q99684 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.16□□□□□ -0.3
GFI1Q99684 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.16□□□□□ -0.3
GFI1Q99684 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.16□□□□□ -0.3
GFI1Q99684 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.16□□□□□ -0.3
GFI1Q99684 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GFI1Q99684 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
GFI1Q99684 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 PCDHA3-202ENST00000532566 4594 ntBASIC13.16□□□□□ -0.3
GFI1Q99684 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
GFI1Q99684 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFI1Q99684 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CICP16-201ENST00000502609 2813 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 TOMM22P5-201ENST00000416399 439 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 AL080243.2-201ENST00000418783 582 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 ALG1L5P-201ENST00000482043 771 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.15□□□□□ -0.3
GFI1Q99684 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.15□□□□□ -0.3
GFI1Q99684 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.15□□□□□ -0.3
GFI1Q99684 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 C20orf181-201ENST00000623918 480 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 AC105339.1-204ENST00000636249 355 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.15□□□□□ -0.3
GFI1Q99684 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 CICP20-201ENST00000443330 2801 ntBASIC13.15□□□□□ -0.3
GFI1Q99684 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.15□□□□□ -0.3
GFI1Q99684 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GFI1Q99684 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.15□□□□□ -0.31
GFI1Q99684 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GFI1Q99684 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GFI1Q99684 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GFI1Q99684 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFI1Q99684 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
GFI1Q99684 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFI1Q99684 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFI1Q99684 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GFI1Q99684 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GFI1Q99684 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
GFI1Q99684 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
GFI1Q99684 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms