Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV9Q99603 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV9Q99603 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV9Q99603 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRGV9Q99603 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV9Q99603 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
TRGV9Q99603 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV9Q99603 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV9Q99603 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV9Q99603 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.93□□□□□ -0.5
TRGV9Q99603 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.93□□□□□ -0.5
TRGV9Q99603 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 AC069262.1-201ENST00000539058 672 ntBASIC11.93□□□□□ -0.5
TRGV9Q99603 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.93□□□□□ -0.5
TRGV9Q99603 AL512361.1-201ENST00000554200 418 ntBASIC11.93□□□□□ -0.5
TRGV9Q99603 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 AC051619.7-201ENST00000568314 623 ntBASIC11.93□□□□□ -0.5
TRGV9Q99603 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TRGV9Q99603 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV9Q99603 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV9Q99603 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV9Q99603 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV9Q99603 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRGV9Q99603 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TRGV9Q99603 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV9Q99603 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV9Q99603 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 HSPA7-201ENST00000445535 1927 ntBASIC11.92□□□□□ -0.5
TRGV9Q99603 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV9Q99603 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRGV9Q99603 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV9Q99603 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TRGV9Q99603 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV9Q99603 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms