Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AL132994.2-201ENST00000603120 687 ntBASIC16.08■□□□□ 0.16
CASD1Q96PB1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.08■□□□□ 0.16
CASD1Q96PB1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.08■□□□□ 0.16
CASD1Q96PB1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
CASD1Q96PB1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CASD1Q96PB1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 AC003102.2-201ENST00000589195 1469 ntBASIC16.08■□□□□ 0.16
CASD1Q96PB1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CASD1Q96PB1 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.08■□□□□ 0.16
CASD1Q96PB1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 AC007274.2-201ENST00000421675 662 ntBASIC16.07■□□□□ 0.16
CASD1Q96PB1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 AP000346.4-201ENST00000614827 381 ntBASIC16.07■□□□□ 0.16
CASD1Q96PB1 AC128714.1-201ENST00000637035 887 ntBASIC16.07■□□□□ 0.16
CASD1Q96PB1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CASD1Q96PB1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CASD1Q96PB1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC087481.3-201ENST00000602886 1894 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AL008718.2-201ENST00000609206 1313 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 RN7SKP214-201ENST00000364208 315 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC012441.2-201ENST00000444843 739 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 MAGEA5-201ENST00000446757 942 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 TMEM198B-204ENST00000484016 896 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC009779.1-201ENST00000551138 283 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 MBLAC2-202ENST00000514906 1936 ntBASIC16.06■□□□□ 0.16
CASD1Q96PB1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASD1Q96PB1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.06■□□□□ 0.16
CASD1Q96PB1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms