Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC109322.1-201ENST00000524499 1264 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC010336.2-201ENST00000564226 506 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC051619.7-201ENST00000568314 623 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AL138828.2-201ENST00000615812 383 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC134684.3-201ENST00000641758 218 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AL137784.3-201ENST00000623858 2288 ntBASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCE1Q969G3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AC140479.7-201ENST00000636301 2332 ntBASIC17.27■□□□□ 0.36
SMARCE1Q969G3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AC015656.1-201ENST00000624209 3578 ntBASIC17.27■□□□□ 0.36
SMARCE1Q969G3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AL596442.2-201ENST00000610240 980 ntBASIC17.27■□□□□ 0.36
SMARCE1Q969G3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AL109936.8-201ENST00000641772 604 ntBASIC17.27■□□□□ 0.36
SMARCE1Q969G3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCE1Q969G3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCE1Q969G3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AC104457.1-201ENST00000401024 814 ntBASIC17.26■□□□□ 0.35
SMARCE1Q969G3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCE1Q969G3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms