Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MBD3L1Q8WWY6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
MBD3L1Q8WWY6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.01□□□□□ -0.49
MBD3L1Q8WWY6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MBD3L1Q8WWY6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MBD3L1Q8WWY6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AC020658.7-201ENST00000624274 2442 ntBASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AGGF1P1-201ENST00000509500 2073 ntBASIC12□□□□□ -0.49
MBD3L1Q8WWY6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PCED1CP-201ENST00000419887 785 ntBASIC12□□□□□ -0.49
MBD3L1Q8WWY6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AC140658.5-201ENST00000438532 169 ntBASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 AC023794.5-201ENST00000564380 2157 ntBASIC12□□□□□ -0.49
MBD3L1Q8WWY6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
MBD3L1Q8WWY6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 FOSL1P1-201ENST00000511041 816 ntBASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 LILRP1-201ENST00000444199 1370 ntBASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MBD3L1Q8WWY6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms