Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 CEND1P1-201ENST00000451006 455 ntBASIC13.31□□□□□ -0.28
CCDC107Q8WV48 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 LINC01225-203ENST00000563550 1244 ntBASIC13.31□□□□□ -0.28
CCDC107Q8WV48 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 AP3S2-216ENST00000617003 1561 ntBASIC13.31□□□□□ -0.28
CCDC107Q8WV48 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC107Q8WV48 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AL359183.1-201ENST00000623796 2132 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AC004832.2-201ENST00000426397 482 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ACTG1P14-201ENST00000446382 1122 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AL139010.1-201ENST00000454878 894 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 KRT8P23-201ENST00000560090 1207 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MIR4313-201ENST00000580760 101 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 AC027601.5-201ENST00000624065 2482 ntBASIC13.3□□□□□ -0.28
CCDC107Q8WV48 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCDC107Q8WV48 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC107Q8WV48 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms