Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AL442647.2-201ENST00000429864 857 ntBASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 CR383656.12-201ENST00000549567 513 ntBASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AL359711.2-201ENST00000563105 872 ntBASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH19Q8TAB3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AL391825.1-201ENST00000457671 1364 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 GK-202ENST00000378941 458 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AL645937.2-201ENST00000396808 931 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 C1QBPP1-201ENST00000400117 770 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 TMEM261P1-201ENST00000604899 340 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 PRSS30P-206ENST00000641773 873 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AL137783.1-201ENST00000623494 1896 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 KRT8P22-201ENST00000562317 1415 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 FAM45BP-202ENST00000592932 1624 ntBASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH19Q8TAB3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH19Q8TAB3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms