Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC245100.3-201ENST00000441281 285 ntBASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 RNA5SP412-201ENST00000516234 123 ntBASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AC022532.1-201ENST00000624563 1728 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CD8B2-202ENST00000417670 633 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AL590640.2-201ENST00000457038 527 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 ECM1P1-201ENST00000604092 1279 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AL359258.3-201ENST00000622910 2331 ntBASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST2Q8NFU1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AC026954.1-201ENST00000429771 1293 ntBASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST2Q8NFU1 AC092658.1-201ENST00000505836 891 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms