Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 AC006548.2-201ENST00000605217 529 ntBASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC168Q8NDH2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AL354861.1-201ENST00000445213 355 ntBASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 REXO1L5P-201ENST00000622260 2098 ntBASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 BRI3P1-201ENST00000440440 378 ntBASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CCDC168Q8NDH2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 AC073592.2-201ENST00000623062 780 ntBASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCDC168Q8NDH2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms