Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 AP002414.2-201ENST00000591780 3365 ntBASIC13.48□□□□□ -0.25
ZIC4Q8N9L1 TSPY26P-202ENST00000565928 3884 ntBASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 GNRHR2-203ENST00000581100 1187 ntBASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 AC233724.13-201ENST00000598383 410 ntBASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 LRRC59-203ENST00000576448 1531 ntBASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZIC4Q8N9L1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AL136379.1-201ENST00000623471 2642 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AC055811.4-201ENST00000624039 1754 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AC005034.1-201ENST00000426657 489 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 BCRP2-202ENST00000447763 634 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 BCRP6-201ENST00000510112 632 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 BCRP7-201ENST00000511549 544 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AL035252.4-201ENST00000624174 288 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 AL603764.1-201ENST00000636452 321 ntBASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ZIC4Q8N9L1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms