Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ACTG1P2-201ENST00000415776 1125 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ACTG1P11-201ENST00000425411 1125 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 NUP210P1-202ENST00000504322 710 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AL023803.2-201ENST00000620080 638 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC022748.3-201ENST00000621828 275 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AC079336.7-201ENST00000623428 1078 ntBASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
TMEFF1Q8IYR6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEFF1Q8IYR6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 DPM3-202ENST00000368399 517 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AL136309.1-201ENST00000403917 691 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 MAGEA5-201ENST00000446757 942 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 FTLP1-201ENST00000449155 526 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 EEF1DP6-201ENST00000449232 372 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 LDHBP1-201ENST00000455730 1119 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AC012618.1-201ENST00000461223 412 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AC106794.1-201ENST00000506935 792 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AC024681.1-201ENST00000521917 487 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 RN7SL574P-201ENST00000581512 297 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AL133499.1-201ENST00000596207 608 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AC004466.1-201ENST00000599515 1080 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 AC138466.3-201ENST00000619983 221 ntBASIC15.08■□□□□ 0
TMEFF1Q8IYR6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEFF1Q8IYR6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms