Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 TSPY25P-201ENST00000429463 745 ntBASIC18.78■□□□□ 0.6
COL23A1Q86Y22 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AC092638.2-201ENST00000441105 947 ntBASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AL354861.1-201ENST00000445213 355 ntBASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 BCAS2P2-201ENST00000425064 674 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 AC012158.2-201ENST00000536546 354 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 RN7SL470P-201ENST00000583069 259 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 AC133540.1-201ENST00000620845 1019 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 AC138466.5-201ENST00000624002 808 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL23A1Q86Y22 AC079328.2-201ENST00000561241 3354 ntBASIC18.77■□□□□ 0.6
COL23A1Q86Y22 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL23A1Q86Y22 AC092127.1-201ENST00000567093 3455 ntBASIC18.77■□□□□ 0.59
COL23A1Q86Y22 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL23A1Q86Y22 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL23A1Q86Y22 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.77■□□□□ 0.59
COL23A1Q86Y22 AL359258.3-201ENST00000622910 2331 ntBASIC18.77■□□□□ 0.59
COL23A1Q86Y22 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL23A1Q86Y22 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 XBP1P1-201ENST00000436573 652 ntBASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 FAM86KP-201ENST00000509817 987 ntBASIC18.76■□□□□ 0.59
COL23A1Q86Y22 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AC073592.2-201ENST00000623062 780 ntBASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AC002472.4-201ENST00000641915 272 ntBASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AP003680.1-201ENST00000598970 3660 ntBASIC18.76■□□□□ 0.59
COL23A1Q86Y22 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.76■□□□□ 0.59
COL23A1Q86Y22 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL23A1Q86Y22 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms