Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AL354861.1-201ENST00000445213 355 ntBASIC10.36□□□□□ -0.75
CSMD3Q7Z407 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.36□□□□□ -0.75
CSMD3Q7Z407 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CSMD3Q7Z407 AC018629.1-201ENST00000623381 1736 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AL109837.1-201ENST00000603272 613 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AC009145.4-201ENST00000625119 1294 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 LINC00431-202ENST00000636375 159 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PCDHA1-201ENST00000378133 2726 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 PUDPP3-201ENST00000445368 636 ntBASIC10.35□□□□□ -0.75
CSMD3Q7Z407 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 RPS5-204ENST00000598098 536 ntTSL 2 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CSMD3Q7Z407 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms