Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
USP45Q70EL2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.31■□□□□ 0.04
USP45Q70EL2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP45Q70EL2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
USP45Q70EL2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
USP45Q70EL2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 BCRP2-202ENST00000447763 634 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 GPR53P-205ENST00000457298 1084 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC106760.1-201ENST00000508690 800 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 BCRP6-201ENST00000510112 632 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 BCRP7-201ENST00000511549 544 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC022616.1-201ENST00000518688 554 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.3■□□□□ 0.04
USP45Q70EL2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AC006486.2-201ENST00000624246 2199 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 AL603764.1-201ENST00000636452 321 ntBASIC15.3■□□□□ 0.04
USP45Q70EL2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.3■□□□□ 0.04
USP45Q70EL2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP45Q70EL2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.29■□□□□ 0.04
USP45Q70EL2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.29■□□□□ 0.04
USP45Q70EL2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.29■□□□□ 0.04
USP45Q70EL2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
USP45Q70EL2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.29■□□□□ 0.04
USP45Q70EL2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.29■□□□□ 0.04
USP45Q70EL2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP45Q70EL2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.29■□□□□ 0.04
USP45Q70EL2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
USP45Q70EL2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.29■□□□□ 0.04
USP45Q70EL2 BOLA2P3-201ENST00000404566 256 ntBASIC15.29■□□□□ 0.04
USP45Q70EL2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.29■□□□□ 0.04
USP45Q70EL2 HLA-K-203ENST00000430151 1046 ntBASIC15.29■□□□□ 0.04
USP45Q70EL2 C2orf27AP3-201ENST00000434123 579 ntBASIC15.29■□□□□ 0.04
USP45Q70EL2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
USP45Q70EL2 AC234783.1-201ENST00000441761 496 ntBASIC15.29■□□□□ 0.04
USP45Q70EL2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms