Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LPCAT4Q643R3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 FOSL1P1-201ENST00000511041 816 ntBASIC14.44□□□□□ -0.1
LPCAT4Q643R3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT4Q643R3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.43□□□□□ -0.1
LPCAT4Q643R3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 FAM210CP-201ENST00000445714 574 ntBASIC14.43□□□□□ -0.1
LPCAT4Q643R3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 AC008608.2-201ENST00000606089 416 ntBASIC14.43□□□□□ -0.1
LPCAT4Q643R3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT4Q643R3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms