Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC087481.3-201ENST00000602886 1894 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC018463.1-201ENST00000456674 917 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AC093752.3-201ENST00000567343 901 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AL132780.4-201ENST00000624870 1135 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 API5-208ENST00000531273 1868 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 NUDT4P2-201ENST00000578341 546 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 CASP16P-204ENST00000635032 809 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 LINC01783-202ENST00000614408 828 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 BX284668.2-205ENST00000619677 828 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 MME-218ENST00000625667 363 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 RBM8B-201ENST00000555532 525 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AC084018.2-201ENST00000613093 2607 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 DKFZP434H168-201ENST00000567381 1905 ntBASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
VPS13DQ5THJ4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AC124068.2-201ENST00000569473 1109 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 C18orf15-201ENST00000623680 2534 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PRAL-201ENST00000624952 3286 ntBASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VPS13DQ5THJ4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms