Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 HIST3H2BA-201ENST00000436555 524 ntBASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AL138828.2-201ENST00000615812 383 ntBASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 MIR6069-201ENST00000620069 79 ntBASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.34□□□□□ -0.27
ATPAF1Q5TC12 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.33□□□□□ -0.27
ATPAF1Q5TC12 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 LINC01230-201ENST00000625222 3017 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 MIR943-201ENST00000401286 94 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC055876.3-201ENST00000431496 288 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC027369.6-201ENST00000525520 931 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 DUX4L27-201ENST00000554796 1261 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AL450472.2-201ENST00000603663 1156 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC138649.4-201ENST00000612222 287 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TEX28P1-201ENST00000613479 1221 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TEX28P2-201ENST00000617764 1221 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 SPDYE12P-201ENST00000618416 771 ntBASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATPAF1Q5TC12 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ATPAF1Q5TC12 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms