Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC00242Q5T6M2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 AL133267.1-201ENST00000398220 340 ntBASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SLED1-202ENST00000512051 380 ntBASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC00242Q5T6M2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC00242Q5T6M2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms