Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTC1Q2NKJ3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 TPM3P8-201ENST00000330554 643 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 KLF2P2-201ENST00000416807 1039 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 RPL17P11-201ENST00000417593 544 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 AL008707.1-201ENST00000422498 534 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 AC114812.1-204ENST00000449669 728 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CTC1Q2NKJ3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC134698.3-201ENST00000523880 214 ntBASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 MIR3907-201ENST00000579424 151 ntBASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 AC006486.2-201ENST00000624246 2199 ntBASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTC1Q2NKJ3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms