Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD47Q08722 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CD47Q08722 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD47Q08722 AL359881.3-201ENST00000602640 1721 ntBASIC14.27□□□□□ -0.13
CD47Q08722 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 AP3S2-216ENST00000617003 1561 ntBASIC14.26□□□□□ -0.13
CD47Q08722 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 AC089987.1-201ENST00000551654 2209 ntBASIC14.26□□□□□ -0.13
CD47Q08722 AP000845.1-201ENST00000581677 2131 ntBASIC14.26□□□□□ -0.13
CD47Q08722 AL359183.1-201ENST00000623796 2132 ntBASIC14.26□□□□□ -0.13
CD47Q08722 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.26□□□□□ -0.13
CD47Q08722 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 AL139010.1-201ENST00000454878 894 ntBASIC14.26□□□□□ -0.13
CD47Q08722 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.26□□□□□ -0.13
CD47Q08722 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.26□□□□□ -0.13
CD47Q08722 AC011467.4-201ENST00000594891 528 ntBASIC14.26□□□□□ -0.13
CD47Q08722 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.26□□□□□ -0.13
CD47Q08722 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CD47Q08722 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CD47Q08722 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD47Q08722 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.26□□□□□ -0.13
CD47Q08722 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 AL136982.4-201ENST00000437689 1740 ntBASIC14.25□□□□□ -0.13
CD47Q08722 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CD47Q08722 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 RPS8P6-201ENST00000426177 609 ntBASIC14.25□□□□□ -0.13
CD47Q08722 PHKG1P2-201ENST00000457537 863 ntBASIC14.25□□□□□ -0.13
CD47Q08722 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.25□□□□□ -0.13
CD47Q08722 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.25□□□□□ -0.13
CD47Q08722 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.25□□□□□ -0.13
CD47Q08722 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.25□□□□□ -0.13
CD47Q08722 AC092865.5-201ENST00000545435 363 ntBASIC14.25□□□□□ -0.13
CD47Q08722 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 RARRES2P9-201ENST00000565168 469 ntBASIC14.25□□□□□ -0.13
CD47Q08722 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CD47Q08722 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 AC097359.3-201ENST00000603982 1210 ntBASIC14.25□□□□□ -0.13
CD47Q08722 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD47Q08722 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CD47Q08722 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.25□□□□□ -0.13
CD47Q08722 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms