Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.99■□□□□ 0.15
IRX4P78413 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.99■□□□□ 0.15
IRX4P78413 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 RN7SL219P-201ENST00000582872 296 ntBASIC15.99■□□□□ 0.15
IRX4P78413 AC015936.2-201ENST00000593177 259 ntBASIC15.99■□□□□ 0.15
IRX4P78413 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 MIR8072-201ENST00000614241 80 ntBASIC15.99■□□□□ 0.15
IRX4P78413 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IRX4P78413 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 AC090616.6-203ENST00000579186 1945 ntBASIC15.99■□□□□ 0.15
IRX4P78413 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IRX4P78413 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 AL589702.1-201ENST00000641229 1509 ntBASIC15.99■□□□□ 0.15
IRX4P78413 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IRX4P78413 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 AC009090.5-201ENST00000624886 2285 ntBASIC15.98■□□□□ 0.15
IRX4P78413 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
IRX4P78413 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.98■□□□□ 0.15
IRX4P78413 RRP7BP-205ENST00000566851 833 ntBASIC15.98■□□□□ 0.15
IRX4P78413 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.98■□□□□ 0.15
IRX4P78413 BTNL10-201ENST00000595971 695 ntBASIC15.98■□□□□ 0.15
IRX4P78413 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.98■□□□□ 0.15
IRX4P78413 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.98■□□□□ 0.15
IRX4P78413 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.98■□□□□ 0.15
IRX4P78413 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AC105250.1-201ENST00000509378 2057 ntBASIC15.98■□□□□ 0.15
IRX4P78413 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
IRX4P78413 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IRX4P78413 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IRX4P78413 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IRX4P78413 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.97■□□□□ 0.15
IRX4P78413 CLK3P2-201ENST00000427566 1453 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms