Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 C1QBPP1-201ENST00000400117 770 ntBASIC14.45□□□□□ -0.1
RAE1P78406 AL442647.2-201ENST00000429864 857 ntBASIC14.45□□□□□ -0.1
RAE1P78406 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RAE1P78406 DFFBP1-201ENST00000433250 979 ntBASIC14.45□□□□□ -0.1
RAE1P78406 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.45□□□□□ -0.1
RAE1P78406 AC123567.1-201ENST00000548294 1261 ntBASIC14.45□□□□□ -0.1
RAE1P78406 AJ011932.1-201ENST00000621707 465 ntBASIC14.45□□□□□ -0.1
RAE1P78406 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 AC139749.1-202ENST00000617529 3139 ntBASIC14.45□□□□□ -0.1
RAE1P78406 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAE1P78406 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.45□□□□□ -0.1
RAE1P78406 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAE1P78406 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.44□□□□□ -0.1
RAE1P78406 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAE1P78406 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.44□□□□□ -0.1
RAE1P78406 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAE1P78406 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAE1P78406 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.44□□□□□ -0.1
RAE1P78406 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.44□□□□□ -0.1
RAE1P78406 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 RNU1-114P-201ENST00000365297 166 ntBASIC14.44□□□□□ -0.1
RAE1P78406 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAE1P78406 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAE1P78406 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 AL139094.1-201ENST00000405549 1188 ntBASIC14.44□□□□□ -0.1
RAE1P78406 NUS1P3-201ENST00000423502 862 ntBASIC14.44□□□□□ -0.1
RAE1P78406 TSPY16P-201ENST00000449843 468 ntBASIC14.44□□□□□ -0.1
RAE1P78406 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.44□□□□□ -0.1
RAE1P78406 AC104596.2-201ENST00000512793 793 ntBASIC14.44□□□□□ -0.1
RAE1P78406 DUX4L47-201ENST00000566374 394 ntBASIC14.44□□□□□ -0.1
RAE1P78406 AL132655.2-201ENST00000596276 594 ntBASIC14.44□□□□□ -0.1
RAE1P78406 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 AC008761.3-201ENST00000624803 892 ntBASIC14.44□□□□□ -0.1
RAE1P78406 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RAE1P78406 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.44□□□□□ -0.1
RAE1P78406 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.44□□□□□ -0.1
RAE1P78406 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAE1P78406 AC007541.1-201ENST00000570282 1469 ntBASIC14.44□□□□□ -0.1
RAE1P78406 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAE1P78406 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.43□□□□□ -0.1
RAE1P78406 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAE1P78406 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAE1P78406 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
RAE1P78406 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.43□□□□□ -0.1
RAE1P78406 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.43□□□□□ -0.1
RAE1P78406 KRT8P14-201ENST00000414254 1442 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms