Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AP001889.1-201ENST00000525414 633 ntBASIC16.53■□□□□ 0.24
SNRPFP62306 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRPFP62306 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRPFP62306 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRPFP62306 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRPFP62306 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.53■□□□□ 0.24
SNRPFP62306 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNRPFP62306 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNRPFP62306 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNRPFP62306 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRPFP62306 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 LINC00554-201ENST00000564841 3011 ntBASIC16.52■□□□□ 0.24
SNRPFP62306 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 AC023824.1-201ENST00000562945 2975 ntBASIC16.52■□□□□ 0.24
SNRPFP62306 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SNRPFP62306 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRPFP62306 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SNRPFP62306 SLC25A47P1-201ENST00000531577 414 ntBASIC16.52■□□□□ 0.24
SNRPFP62306 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.52■□□□□ 0.24
SNRPFP62306 AC145423.3-201ENST00000615987 467 ntBASIC16.52■□□□□ 0.24
SNRPFP62306 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.52■□□□□ 0.24
SNRPFP62306 AC105233.6-201ENST00000642093 218 ntBASIC16.52■□□□□ 0.24
SNRPFP62306 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SNRPFP62306 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SNRPFP62306 AL138709.1-201ENST00000614840 1693 ntBASIC16.52■□□□□ 0.23
SNRPFP62306 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.52■□□□□ 0.23
SNRPFP62306 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SNRPFP62306 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SNRPFP62306 AC099063.4-201ENST00000641099 1602 ntBASIC16.52■□□□□ 0.23
SNRPFP62306 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNRPFP62306 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SNRPFP62306 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 AL035633.1-201ENST00000406139 838 ntBASIC16.51■□□□□ 0.23
SNRPFP62306 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNRPFP62306 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRPFP62306 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRPFP62306 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.51■□□□□ 0.23
SNRPFP62306 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SNRPFP62306 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.51■□□□□ 0.23
SNRPFP62306 AC233724.13-201ENST00000598383 410 ntBASIC16.51■□□□□ 0.23
SNRPFP62306 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.51■□□□□ 0.23
SNRPFP62306 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.51■□□□□ 0.23
SNRPFP62306 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
SNRPFP62306 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms