Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PER3P56645 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PER3P56645 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 AP005117.1-202ENST00000581724 1908 ntBASIC14.25□□□□□ -0.13
PER3P56645 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.25□□□□□ -0.13
PER3P56645 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 AC092506.1-202ENST00000401022 528 ntBASIC14.25□□□□□ -0.13
PER3P56645 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.25□□□□□ -0.13
PER3P56645 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.25□□□□□ -0.13
PER3P56645 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.25□□□□□ -0.13
PER3P56645 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.25□□□□□ -0.13
PER3P56645 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.25□□□□□ -0.13
PER3P56645 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PER3P56645 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PER3P56645 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.24□□□□□ -0.13
PER3P56645 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.24□□□□□ -0.13
PER3P56645 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.24□□□□□ -0.13
PER3P56645 YBX1P6-201ENST00000442962 1002 ntBASIC14.24□□□□□ -0.13
PER3P56645 CSF2RBP1-201ENST00000447905 391 ntBASIC14.24□□□□□ -0.13
PER3P56645 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 RPL13AP25-201ENST00000484130 612 ntBASIC14.24□□□□□ -0.13
PER3P56645 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.24□□□□□ -0.13
PER3P56645 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PER3P56645 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.24□□□□□ -0.13
PER3P56645 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.24□□□□□ -0.13
PER3P56645 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PER3P56645 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms