Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 CYP4F24P-201ENST00000586049 1580 ntBASIC12.14□□□□□ -0.47
CDC34P49427 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC34P49427 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 EEF1DP4-201ENST00000446006 880 ntBASIC12.14□□□□□ -0.47
CDC34P49427 AC108751.1-201ENST00000490852 363 ntBASIC12.14□□□□□ -0.47
CDC34P49427 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC34P49427 AF238378.1-201ENST00000526806 358 ntBASIC12.14□□□□□ -0.47
CDC34P49427 MIR3652-201ENST00000579335 131 ntBASIC12.14□□□□□ -0.47
CDC34P49427 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 AC093458.2-201ENST00000623150 629 ntBASIC12.14□□□□□ -0.47
CDC34P49427 MST1P2-201ENST00000457982 2291 ntBASIC12.14□□□□□ -0.47
CDC34P49427 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC34P49427 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC34P49427 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC34P49427 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC34P49427 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 CICP17-201ENST00000418553 2377 ntBASIC12.13□□□□□ -0.47
CDC34P49427 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
CDC34P49427 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 AL139010.1-201ENST00000454878 894 ntBASIC12.13□□□□□ -0.47
CDC34P49427 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC34P49427 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.13□□□□□ -0.47
CDC34P49427 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.13□□□□□ -0.47
CDC34P49427 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CDC34P49427 AC073389.1-201ENST00000595595 795 ntBASIC12.13□□□□□ -0.47
CDC34P49427 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 AC007064.4-201ENST00000637740 555 ntBASIC12.13□□□□□ -0.47
CDC34P49427 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CDC34P49427 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CDC34P49427 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC34P49427 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms