Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BRCC3P46736 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.16■□□□□ 0.18
BRCC3P46736 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BRCC3P46736 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.16■□□□□ 0.18
BRCC3P46736 GPAA1P2-201ENST00000417923 928 ntBASIC16.16■□□□□ 0.18
BRCC3P46736 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.16■□□□□ 0.18
BRCC3P46736 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.16■□□□□ 0.18
BRCC3P46736 MESTP3-201ENST00000503460 968 ntBASIC16.16■□□□□ 0.18
BRCC3P46736 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.16■□□□□ 0.18
BRCC3P46736 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.16■□□□□ 0.18
BRCC3P46736 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRCC3P46736 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
BRCC3P46736 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BRCC3P46736 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.15■□□□□ 0.18
BRCC3P46736 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.15■□□□□ 0.18
BRCC3P46736 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.15■□□□□ 0.18
BRCC3P46736 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BRCC3P46736 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BRCC3P46736 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.15■□□□□ 0.18
BRCC3P46736 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.15■□□□□ 0.18
BRCC3P46736 FTLP10-202ENST00000505798 471 ntBASIC16.15■□□□□ 0.18
BRCC3P46736 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
BRCC3P46736 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BRCC3P46736 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.15■□□□□ 0.18
BRCC3P46736 AL022328.3-201ENST00000607943 679 ntBASIC16.15■□□□□ 0.18
BRCC3P46736 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 AL008638.5-201ENST00000623814 1298 ntBASIC16.15■□□□□ 0.18
BRCC3P46736 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.15■□□□□ 0.18
BRCC3P46736 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRCC3P46736 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.14■□□□□ 0.18
BRCC3P46736 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BRCC3P46736 AC018735.1-201ENST00000437208 1502 ntBASIC16.14■□□□□ 0.18
BRCC3P46736 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.14■□□□□ 0.18
BRCC3P46736 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.14■□□□□ 0.17
BRCC3P46736 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.14■□□□□ 0.17
BRCC3P46736 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
BRCC3P46736 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BRCC3P46736 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 TMBIM7P-203ENST00000641617 1718 ntBASIC16.14■□□□□ 0.17
BRCC3P46736 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.14■□□□□ 0.17
BRCC3P46736 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.14■□□□□ 0.17
BRCC3P46736 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRCC3P46736 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms