Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AC073592.8-201ENST00000624126 511 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AF228730.6-201ENST00000641497 218 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AC084121.3-201ENST00000641716 218 ntBASIC16.36■□□□□ 0.21
SSR1P43307 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 AC106881.1-201ENST00000605849 3329 ntBASIC16.36■□□□□ 0.21
SSR1P43307 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.36■□□□□ 0.21
SSR1P43307 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.36■□□□□ 0.21
SSR1P43307 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSR1P43307 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SSR1P43307 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.35■□□□□ 0.21
SSR1P43307 RPL5P21-201ENST00000404620 815 ntBASIC16.35■□□□□ 0.21
SSR1P43307 AC074338.1-201ENST00000416825 156 ntBASIC16.35■□□□□ 0.21
SSR1P43307 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.35■□□□□ 0.21
SSR1P43307 HLA-V-204ENST00000476601 1289 ntBASIC16.35■□□□□ 0.21
SSR1P43307 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.35■□□□□ 0.21
SSR1P43307 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.35■□□□□ 0.21
SSR1P43307 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 TEX28P1-201ENST00000613479 1221 ntBASIC16.35■□□□□ 0.21
SSR1P43307 TEX28P2-201ENST00000617764 1221 ntBASIC16.35■□□□□ 0.21
SSR1P43307 AC093028.1-201ENST00000622998 982 ntBASIC16.35■□□□□ 0.21
SSR1P43307 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SSR1P43307 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSR1P43307 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.35■□□□□ 0.21
SSR1P43307 AC015656.1-201ENST00000624209 3578 ntBASIC16.35■□□□□ 0.21
SSR1P43307 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SSR1P43307 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SSR1P43307 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.34■□□□□ 0.21
SSR1P43307 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.34■□□□□ 0.21
SSR1P43307 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.34■□□□□ 0.21
SSR1P43307 AC107890.1-201ENST00000422478 521 ntBASIC16.34■□□□□ 0.21
SSR1P43307 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.34■□□□□ 0.21
SSR1P43307 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.34■□□□□ 0.21
SSR1P43307 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.34■□□□□ 0.21
SSR1P43307 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SSR1P43307 AC025048.3-201ENST00000590609 569 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms