Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.38□□□□□ -0.27
GDNFP39905 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 UPF3AP3-201ENST00000420996 769 ntBASIC13.38□□□□□ -0.27
GDNFP39905 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 AC069335.1-201ENST00000489972 472 ntBASIC13.38□□□□□ -0.27
GDNFP39905 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 YBX1P5-201ENST00000509441 847 ntBASIC13.38□□□□□ -0.27
GDNFP39905 AC105233.2-201ENST00000523697 349 ntBASIC13.38□□□□□ -0.27
GDNFP39905 AF228730.5-201ENST00000530288 346 ntBASIC13.38□□□□□ -0.27
GDNFP39905 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 AP000842.3-202ENST00000569238 1080 ntBASIC13.38□□□□□ -0.27
GDNFP39905 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 AC022145.2-201ENST00000598203 171 ntBASIC13.38□□□□□ -0.27
GDNFP39905 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 AC105339.1-204ENST00000636249 355 ntBASIC13.38□□□□□ -0.27
GDNFP39905 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.38□□□□□ -0.27
GDNFP39905 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.38□□□□□ -0.27
GDNFP39905 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.38□□□□□ -0.27
GDNFP39905 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GDNFP39905 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GDNFP39905 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 CICP11-201ENST00000434745 2827 ntBASIC13.37□□□□□ -0.27
GDNFP39905 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.37□□□□□ -0.27
GDNFP39905 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.37□□□□□ -0.27
GDNFP39905 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GDNFP39905 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.37□□□□□ -0.27
GDNFP39905 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GDNFP39905 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 AL592309.1-201ENST00000443127 649 ntBASIC13.37□□□□□ -0.27
GDNFP39905 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GDNFP39905 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.37□□□□□ -0.27
GDNFP39905 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms