Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SNCAP37840 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SNCAP37840 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.66□□□□□ -0.38
SNCAP37840 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 AL671277.1-201ENST00000429656 993 ntBASIC12.66□□□□□ -0.38
SNCAP37840 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.66□□□□□ -0.38
SNCAP37840 AL591424.1-201ENST00000442569 1213 ntBASIC12.66□□□□□ -0.38
SNCAP37840 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.66□□□□□ -0.38
SNCAP37840 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.66□□□□□ -0.38
SNCAP37840 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.66□□□□□ -0.38
SNCAP37840 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 RN7SL589P-201ENST00000481268 310 ntBASIC12.66□□□□□ -0.38
SNCAP37840 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.66□□□□□ -0.38
SNCAP37840 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.66□□□□□ -0.38
SNCAP37840 AC027307.2-201ENST00000591252 911 ntBASIC12.66□□□□□ -0.38
SNCAP37840 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 AC026979.3-201ENST00000607315 403 ntBASIC12.66□□□□□ -0.38
SNCAP37840 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.66□□□□□ -0.38
SNCAP37840 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 AC018892.3-201ENST00000623986 2499 ntBASIC12.66□□□□□ -0.38
SNCAP37840 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.65□□□□□ -0.38
SNCAP37840 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.65□□□□□ -0.38
SNCAP37840 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.65□□□□□ -0.38
SNCAP37840 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.65□□□□□ -0.38
SNCAP37840 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.65□□□□□ -0.38
SNCAP37840 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.65□□□□□ -0.38
SNCAP37840 AL139010.1-201ENST00000454878 894 ntBASIC12.65□□□□□ -0.38
SNCAP37840 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 AL450472.2-201ENST00000603663 1156 ntBASIC12.65□□□□□ -0.38
SNCAP37840 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.65□□□□□ -0.38
SNCAP37840 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SNCAP37840 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms