Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM23P36406 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM23P36406 AC092658.1-201ENST00000505836 891 ntBASIC14.99□□□□□ -0.01
TRIM23P36406 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.99□□□□□ -0.01
TRIM23P36406 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM23P36406 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRIM23P36406 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 C2orf69P2-201ENST00000562032 1123 ntBASIC14.99□□□□□ -0.01
TRIM23P36406 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.99□□□□□ -0.01
TRIM23P36406 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.99□□□□□ -0.01
TRIM23P36406 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.99□□□□□ -0.01
TRIM23P36406 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRIM23P36406 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRIM23P36406 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 AC023024.2-201ENST00000623561 1993 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRIM23P36406 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 AC104640.1-201ENST00000562617 2109 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 AL359258.3-201ENST00000622910 2331 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 AL137783.1-201ENST00000623494 1896 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 FAM8A4P-201ENST00000435433 1213 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 MESTP3-201ENST00000503460 968 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.98□□□□□ -0.01
TRIM23P36406 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.98□□□□□ -0.01
TRIM23P36406 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.98□□□□□ -0.01
TRIM23P36406 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 AP000845.1-201ENST00000581677 2131 ntBASIC14.98□□□□□ -0.01
TRIM23P36406 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM23P36406 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM23P36406 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM23P36406 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM23P36406 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM23P36406 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM23P36406 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms